Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein hsp20 | AfiDRAFT_0474 | Not Available | + | 478429 - 478893 | 16890.8 |
| rna polymerase, sigma-24 subunit, ecf subfamily | AfiDRAFT_0475 | Not Available | - | 478955 - 479827 | 31351.6 |
| alkylhydroperoxidase like protein, ahpd family | AfiDRAFT_0476 | Not Available | + | 479934 - 480392 | 16931.3 |
| conserved hypothetical protein | AfiDRAFT_0477 | Not Available | - | 480435 - 481232 | 27855.4 |
| glutamate synthase (ferredoxin) | AfiDRAFT_0478 | Not Available | + | 481712 - 486481 | 174277.0 |
| glutamate synthase, nadh/nadph, small subunit | AfiDRAFT_0479 | Not Available | + | 486613 - 488070 | 52730.1 |
| protein of unknown function duf1236 | AfiDRAFT_0480 | Not Available | - | 488139 - 488525 | 13305.2 |
| protein of unknown function duf459 | AfiDRAFT_0481 | Not Available | - | 488714 - 490279 | 56078.4 |
| lytic murein transglycosylase | AfiDRAFT_0482 | Not Available | - | 490442 - 491800 | 49213.5 |
| utp-glucose-1-phosphate uridylyltransferase | AfiDRAFT_0483 | Not Available | + | 492064 - 492936 | 32009.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
