Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heavy metal translocating p-type atpase | AfiDRAFT_3681 | Not Available | - | 3825695 - 3827668 | 68765.9 |
| protein of unknown function duf125 transmembrane | AfiDRAFT_3682 | Not Available | - | 3827671 - 3828366 | 23683.8 |
| cytochrome b561 | AfiDRAFT_3683 | Not Available | - | 3828972 - 3829514 | 20003.6 |
| cytochrome b561 | AfiDRAFT_3684 | Not Available | - | 3829826 - 3830383 | 20138.8 |
| conserved hypothetical protein | AfiDRAFT_3685 | Not Available | - | 3830403 - 3830675 | 9599.77 |
| peptidase | AfiDRAFT_3686 | Not Available | + | 3830825 - 3831136 | 11443.8 |
| two component transcriptional regulator, winged helix family | AfiDRAFT_3687 | Not Available | + | 3831136 - 3831798 | 24390.3 |
| integral membrane sensor signal transduction histidine kinase | AfiDRAFT_3688 | Not Available | + | 3831798 - 3833210 | 49900.9 |
| efflux transporter, rnd family, mfp subunit | AfiDRAFT_3689 | Not Available | + | 3833655 - 3834779 | 39621.6 |
| heavy metal efflux pump, czca family | AfiDRAFT_3690 | Not Available | + | 3834782 - 3837859 | 109988.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
