Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative exported protein of unknown function | AfiDRAFT_3252 | Not Available | - | 3406150 - 3406389 | 8406.59 |
| peptidase m23 | AfiDRAFT_3253 | Not Available | - | 3406640 - 3407944 | 45450.8 |
| protein-l-isoaspartate o-methyltransferase | AfiDRAFT_3254 | Not Available | - | 3408089 - 3408742 | 23955.8 |
| response regulator receiver protein | AfiDRAFT_3255 | Not Available | + | 3408903 - 3409280 | 13935.0 |
| stationary-phase survival protein sure | AfiDRAFT_3256 | Not Available | - | 3409283 - 3410047 | 28075.4 |
| seryl-trna synthetase | AfiDRAFT_3257 | Not Available | - | 3410052 - 3411512 | 53882.4 |
| sec-independent protein translocase, tatc subunit | AfiDRAFT_3258 | Not Available | - | 3411644 - 3412471 | 30169.0 |
| twin-arginine translocation protein, tatb subunit | AfiDRAFT_3259 | Not Available | - | 3412468 - 3412914 | 16007.9 |
| twin-arginine translocation protein, tata/e family subunit | AfiDRAFT_3260 | Not Available | - | 3412973 - 3413212 | 8467.24 |
| redoxin domain protein | AfiDRAFT_3261 | Not Available | - | 3413384 - 3415153 | 62713.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
