Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| selenocysteine-specific translation elongation factor | AfiDRAFT_0287 | Not Available | - | 291971 - 294070 | 75163.9 |
| sel1 domain protein repeat-containing protein | AfiDRAFT_0288 | Not Available | - | 294070 - 294891 | 28774.2 |
| l-seryl-trna selenium transferase | AfiDRAFT_0289 | Not Available | - | 294891 - 296306 | 49601.1 |
| formate dehydrogenase accessory protein fdhe | AfiDRAFT_0290 | Not Available | - | 296317 - 297231 | 32674.2 |
| formate dehydrogenase, gamma subunit | AfiDRAFT_0291 | Not Available | - | 297371 - 298042 | 25133.9 |
| formate dehydrogenase, beta subunit | AfiDRAFT_0292 | Not Available | - | 298039 - 298977 | 34059.7 |
| formate dehydrogenase, alpha subunit | AfiDRAFT_0293 | Not Available | - | 298993 - 301419 | 90414.6 |
| molybdopterin oxidoreductase fe4s4 region | AfiDRAFT_0294 | Not Available | - | 301468 - 302067 | 21929.5 |
| alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen | AfiDRAFT_0295 | Not Available | + | 302532 - 303101 | 20775.8 |
| transglutaminase domain protein | AfiDRAFT_0296 | Not Available | + | 303128 - 304234 | 40124.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
