Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function duf2189, transmembrane | AfiDRAFT_3242 | Not Available | + | 3396811 - 3397713 | 32247.3 |
| intracellular protease, pfpi family | AfiDRAFT_3243 | Not Available | + | 3397785 - 3398342 | 20139.3 |
| protein of unknown function duf1127 | AfiDRAFT_3244 | Not Available | + | 3398860 - 3399018 | 5956.18 |
| gid protein | AfiDRAFT_3245 | Not Available | + | 3399145 - 3400578 | 51308.5 |
| squalene/phytoene synthase | AfiDRAFT_3246 | Not Available | - | 3400575 - 3401441 | 31895.3 |
| protein of unknown function duf498 | AfiDRAFT_3247 | Not Available | - | 3401438 - 3401821 | 13610.5 |
| protein-export membrane protein secf | AfiDRAFT_3248 | Not Available | - | 3401818 - 3402876 | 38411.8 |
| protein-export membrane protein secd | AfiDRAFT_3249 | Not Available | - | 3402889 - 3404487 | 57197.9 |
| preprotein translocase, yajc subunit | AfiDRAFT_3250 | Not Available | - | 3404528 - 3404872 | 12458.4 |
| protein of unknown function duf815 | AfiDRAFT_3251 | Not Available | + | 3405065 - 3406060 | 36604.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
