Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein imub | AfiDRAFT_3182 | Not Available | + | 3320820 - 3322250 | 52309.5 |
| dna polymerase iii, alpha subunit | AfiDRAFT_3183 | Not Available | + | 3322247 - 3325573 | 124929.0 |
| amp-dependent synthetase and ligase | AfiDRAFT_3184 | Not Available | + | 3326148 - 3327674 | 54663.6 |
| protein of unknown function duf2088 | AfiDRAFT_3185 | Not Available | + | 3327671 - 3329086 | 52120.9 |
| 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (air) carboxylase | AfiDRAFT_3186 | Not Available | + | 3329107 - 3329820 | 25213.6 |
| putative abc transporter periplasmic substrate-binding protein | AfiDRAFT_3187 | Not Available | + | 3329848 - 3330864 | 36231.0 |
| protein of unknown function duf111 | AfiDRAFT_3188 | Not Available | + | 3331171 - 3332172 | 36514.6 |
| pp-loop domain protein | AfiDRAFT_3189 | Not Available | + | 3332169 - 3332957 | 28518.7 |
| high-affinity nickel-transporter | AfiDRAFT_3190 | Not Available | + | 3332990 - 3333688 | 25113.2 |
| tonb-dependent receptor plug | AfiDRAFT_3191 | Not Available | + | 3333721 - 3336075 | 85312.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
