Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AfiDRAFT_3172 | Not Available | + | 3309775 - 3309969 | 6995.57 |
| hypothetical protein | AfiDRAFT_3173 | Not Available | - | 3310918 - 3311163 | 9033.02 |
| protein of unknown function duf892 | AfiDRAFT_3174 | Not Available | + | 3311699 - 3312211 | 18761.5 |
| metallophosphoesterase | AfiDRAFT_3175 | Not Available | - | 3312389 - 3313084 | 25330.5 |
| dead/h associated domain protein | AfiDRAFT_3176 | Not Available | - | 3313081 - 3315645 | 94908.7 |
| mrna 3'-end processing factor | AfiDRAFT_3177 | Not Available | + | 3315783 - 3316817 | 37311.8 |
| atp dependent dna ligase | AfiDRAFT_3178 | Not Available | + | 3316814 - 3318523 | 64175.4 |
| cupin 2 conserved barrel domain protein | AfiDRAFT_3179 | Not Available | - | 3318492 - 3318992 | 18587.8 |
| phage spo1 dna polymerase-related protein | AfiDRAFT_3180 | Not Available | - | 3319057 - 3319710 | 24088.0 |
| conserved hypothetical protein | AfiDRAFT_3181 | Not Available | + | 3319943 - 3320755 | 29039.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
