Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transposase | AfiDRAFT_3162 | Not Available | + | 3302715 - 3302849 | 4929.1 |
| integrase catalytic region | AfiDRAFT_3163 | Not Available | + | 3303012 - 3303350 | 12325.2 |
| hypothetical protein | AfiDRAFT_3164 | Not Available | - | 3303478 - 3303645 | 6527.76 |
| hypothetical protein | AfiDRAFT_3165 | Not Available | - | 3304034 - 3304174 | 5491.59 |
| helix-turn-helix, arac domain protein | AfiDRAFT_3166 | Not Available | - | 3304208 - 3304639 | 16413.9 |
| amylo-alpha-16-glucosidase | AfiDRAFT_3167 | Not Available | - | 3304762 - 3306969 | 81400.6 |
| glycosyl transferase group 1 | AfiDRAFT_3168 | Not Available | - | 3306962 - 3308074 | 41431.3 |
| conserved hypothetical protein | AfiDRAFT_3169 | Not Available | + | 3308350 - 3308574 | 8350.02 |
| hypothetical protein | AfiDRAFT_3170 | Not Available | - | 3308966 - 3309214 | 8106.52 |
| protein of unknown function duf1488 | AfiDRAFT_3171 | Not Available | + | 3309301 - 3309600 | 11217.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
