Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nmt1/thi5 like domain protein | AfiDRAFT_3152 | Not Available | + | 3292235 - 3293221 | 35434.4 |
| alpha/beta hydrolase fold protein | AfiDRAFT_3153 | Not Available | + | 3293229 - 3294146 | 33407.5 |
| transcriptional regulator, asnc family | AfiDRAFT_3154 | Not Available | - | 3294135 - 3294596 | 17225.1 |
| transketolase central region | AfiDRAFT_3155 | Not Available | + | 3294736 - 3297144 | 88094.7 |
| putative outer membrane recepter signal peptide protein | AfiDRAFT_3156 | Not Available | + | 3297378 - 3297614 | 8665.6 |
| chab family protein | AfiDRAFT_3157 | Not Available | - | 3297996 - 3298217 | 8545.95 |
| nitroreductase | AfiDRAFT_3158 | Not Available | - | 3298268 - 3298825 | 20226.4 |
| protein-l-isoaspartate o-methyltransferase | AfiDRAFT_3159 | Not Available | + | 3299063 - 3301105 | 76526.7 |
| protein of unknown function duf395 yeee/yede | AfiDRAFT_3160 | Not Available | + | 3301399 - 3301920 | 17671.9 |
| protein of unknown function duf395 yeee/yede | AfiDRAFT_3161 | Not Available | + | 3301936 - 3302568 | 22391.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
