Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | AfiDRAFT_3133 | Not Available | + | 3274593 - 3276293 | 60099.8 |
| Trna-gln | Not Available | Not Available | + | 3276533 - 3276607 | Not Available |
| transcriptional regulator, lysr family | AfiDRAFT_3134 | Not Available | - | 3277218 - 3277445 | 8500.3 |
| transcriptional regulator, iclr family | AfiDRAFT_3135 | Not Available | - | 3277448 - 3278227 | 28877.0 |
| mandelate racemase/muconate lactonizing protein | AfiDRAFT_3136 | Not Available | - | 3278260 - 3279348 | 39736.9 |
| conserved hypothetical protein | AfiDRAFT_3137 | Not Available | + | 3279488 - 3280453 | 34413.4 |
| conserved hypothetical protein | AfiDRAFT_3138 | Not Available | + | 3280498 - 3281073 | 20766.0 |
| protein of unknown function duf112 transmembrane | AfiDRAFT_3139 | Not Available | + | 3281084 - 3282637 | 54515.3 |
| amidohydrolase 2 | AfiDRAFT_3140 | Not Available | + | 3282672 - 3283745 | 40677.6 |
| rieske (2fe-2s) iron-sulfur domain protein | AfiDRAFT_3141 | Not Available | + | 3283749 - 3284114 | 13205.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
