Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| saf domain protein | AfiDRAFT_3083 | Not Available | + | 3218328 - 3218654 | 11653.1 |
| altronate dehydratase | AfiDRAFT_3084 | Not Available | + | 3218665 - 3219936 | 45703.3 |
| d-isomer specific 2-hydroxyacid dehydrogenase nad-binding | AfiDRAFT_3085 | Not Available | + | 3220001 - 3220921 | 32453.6 |
| malate/l-lactate dehydrogenase | AfiDRAFT_3086 | Not Available | + | 3220918 - 3221925 | 33915.0 |
| transcriptional regulator, gntr family | AfiDRAFT_3087 | Not Available | + | 3222034 - 3222780 | 27556.4 |
| diguanylate cyclase/phosphodiesterase with pas/pac sensor(s) | AfiDRAFT_3088 | Not Available | + | 3222950 - 3225664 | 100899.0 |
| glutamine amidotransferase class-i | AfiDRAFT_3089 | Not Available | - | 3225680 - 3226465 | 28983.9 |
| pas/pac sensor signal transduction histidine kinase | AfiDRAFT_3090 | Not Available | + | 3226576 - 3227643 | 39862.7 |
| two component transcriptional regulator, luxr family | AfiDRAFT_3091 | Not Available | + | 3227640 - 3228272 | 22802.7 |
| n-isopropylammelide isopropylaminohydrolase | AfiDRAFT_3092 | Not Available | + | 3228424 - 3229737 | 47977.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
