Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methylmalonate-semialdehyde dehydrogenase | AfiDRAFT_3073 | Not Available | + | 3208847 - 3210346 | 53848.6 |
| abc transporter related protein | AfiDRAFT_3074 | Not Available | + | 3210792 - 3211589 | 29898.7 |
| binding-protein-dependent transport systems inner membrane component | AfiDRAFT_3075 | Not Available | + | 3211582 - 3212478 | 32466.2 |
| nitrate/sulfonate/bicarbonate abc transporter periplasmic ligand-binding protein | AfiDRAFT_3076 | Not Available | + | 3212546 - 3213568 | 36519.1 |
| succinate dehydrogenase and fumarate reductase iron-sulfur protein | AfiDRAFT_3077 | Not Available | + | 3213596 - 3214342 | 27697.7 |
| conserved hypothetical protein | AfiDRAFT_3078 | Not Available | + | 3214339 - 3214668 | 11793.7 |
| succinate dehydrogenase cytochrome b subunit | AfiDRAFT_3079 | Not Available | + | 3214665 - 3215012 | 12051.3 |
| hydro-lyase, fe-s type, tartrate/fumarate subfamily, alpha subunit | AfiDRAFT_3080 | Not Available | + | 3215017 - 3215892 | 31068.6 |
| l(+)-tartrate dehydratase | AfiDRAFT_3081 | Not Available | + | 3215903 - 3216511 | 22178.9 |
| fumarate reductase/succinate dehydrogenase flavoprotein domain protein | AfiDRAFT_3082 | Not Available | + | 3216515 - 3218242 | 61643.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
