Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis sensory transducer | AfiDRAFT_3063 | Not Available | - | 3195213 - 3196895 | 59197.5 |
| (uracil-5)-methyltransferase | AfiDRAFT_3064 | Not Available | - | 3197123 - 3198364 | 44254.2 |
| hemolysin a | AfiDRAFT_3065 | Not Available | - | 3198364 - 3199095 | 25937.2 |
| deoxyxylulose-5-phosphate synthase | AfiDRAFT_3066 | Not Available | - | 3199134 - 3201050 | 68078.6 |
| exodeoxyribonuclease vii, small subunit | AfiDRAFT_3067 | Not Available | - | 3201235 - 3201486 | 9270.05 |
| histone deacetylase superfamily | AfiDRAFT_3068 | Not Available | - | 3201560 - 3202492 | 33854.3 |
| enoyl-coa hydratase/isomerase | AfiDRAFT_3069 | Not Available | - | 3202547 - 3203293 | 26736.4 |
| acyl-coa dehydrogenase domain protein | AfiDRAFT_3070 | Not Available | - | 3203447 - 3205231 | 62823.8 |
| tonb-dependent siderophore receptor | AfiDRAFT_3071 | Not Available | + | 3205502 - 3207802 | 83249.5 |
| transcriptional regulator, lysr family | AfiDRAFT_3072 | Not Available | - | 3207806 - 3208693 | 33425.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
