Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chaperone dnaj domain protein | AfiDRAFT_3053 | Not Available | + | 3188134 - 3189114 | 34065.4 |
| hypothetical protein | AfiDRAFT_3054 | Not Available | + | 3189202 - 3189507 | 11215.6 |
| hypothetical protein | AfiDRAFT_3055 | Not Available | - | 3189513 - 3189617 | 3876.82 |
| prc-barrel domain protein | AfiDRAFT_3056 | Not Available | + | 3189647 - 3189997 | 12573.0 |
| putative transmembrane anti-sigma factor | AfiDRAFT_3057 | Not Available | - | 3190096 - 3190869 | 28505.6 |
| rna polymerase, sigma-24 subunit, ecf subfamily | AfiDRAFT_3058 | Not Available | - | 3190897 - 3191382 | 18136.9 |
| short-chain dehydrogenase/reductase sdr | AfiDRAFT_3059 | Not Available | + | 3191595 - 3192413 | 29536.3 |
| phosphoglycerate mutase | AfiDRAFT_3060 | Not Available | + | 3192566 - 3193165 | 22048.1 |
| chorismate synthase | AfiDRAFT_3061 | Not Available | + | 3193370 - 3194452 | 38854.2 |
| conserved hypothetical protein | AfiDRAFT_3062 | Not Available | + | 3194543 - 3195145 | 21062.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
