Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | AfiDRAFT_2974 | Not Available | - | 3104440 - 3105201 | 27976.2 |
| hypothetical protein | AfiDRAFT_2975 | Not Available | - | 3105497 - 3105895 | 13745.5 |
| ribosomal small subunit rsm22 | AfiDRAFT_2976 | Not Available | - | 3105962 - 3106942 | 34910.8 |
| chromosome segregation protein smc | AfiDRAFT_2977 | Not Available | - | 3106970 - 3110434 | 126431.0 |
| dsba oxidoreductase | AfiDRAFT_2978 | Not Available | - | 3110734 - 3111387 | 23579.5 |
| protein of unknown function duf721 | AfiDRAFT_2979 | Not Available | - | 3111500 - 3111979 | 17712.4 |
| a/g-specific adenine glycosylase | AfiDRAFT_2980 | Not Available | + | 3112067 - 3113116 | 38587.1 |
| glutathione s-transferase domain protein | AfiDRAFT_2981 | Not Available | + | 3113119 - 3113739 | 22850.4 |
| dna methylase n-4/n-6 domain protein | AfiDRAFT_2982 | Not Available | - | 3113816 - 3114946 | 41650.9 |
| protein of unknown function zinc metallopeptidase putative | AfiDRAFT_2983 | Not Available | + | 3115333 - 3116274 | 33222.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
