Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | AfiDRAFT_2884 | Not Available | + | 3007761 - 3008957 | 43485.9 |
| major facilitator superfamily mfs_1 | AfiDRAFT_2885 | Not Available | - | 3008976 - 3010232 | 43962.0 |
| auxin efflux carrier | AfiDRAFT_2886 | Not Available | + | 3010468 - 3011403 | 32808.4 |
| alpha/beta hydrolase fold protein | AfiDRAFT_2887 | Not Available | - | 3011400 - 3012311 | 33718.1 |
| transcriptional regulator, lysr family | AfiDRAFT_2888 | Not Available | + | 3012583 - 3013485 | 33116.4 |
| thioesterase superfamily protein | AfiDRAFT_2889 | Not Available | + | 3013782 - 3014204 | 15058.9 |
| 2-methylcitrate dehydratase | AfiDRAFT_2890 | Not Available | + | 3014226 - 3015743 | 55396.8 |
| 2-methylcitrate synthase/citrate synthase ii | AfiDRAFT_2891 | Not Available | + | 3015846 - 3017021 | 42600.0 |
| methylisocitrate lyase | AfiDRAFT_2892 | Not Available | + | 3017031 - 3017945 | 32850.7 |
| conserved hypothetical protein | AfiDRAFT_2893 | Not Available | + | 3018082 - 3018321 | 8736.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
