Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | AfiDRAFT_2844 | Not Available | + | 2964206 - 2964745 | 18881.4 |
| conserved hypothetical protein | AfiDRAFT_2845 | Not Available | + | 2964691 - 2966331 | 58546.5 |
| phosphonate abc transporter, periplasmic phosphonate-binding protein | AfiDRAFT_2846 | Not Available | + | 2966375 - 2967259 | 31639.0 |
| phosphonate abc transporter, inner membrane subunit | AfiDRAFT_2847 | Not Available | + | 2967324 - 2968139 | 29519.6 |
| phosphonate abc transporter, atpase subunit | AfiDRAFT_2848 | Not Available | + | 2968154 - 2968966 | 29230.1 |
| methionine synthase vitamin-b12 independent | AfiDRAFT_2849 | Not Available | + | 2968977 - 2970497 | 55063.0 |
| aspartate 1-decarboxylase | AfiDRAFT_2850 | Not Available | + | 2970766 - 2971113 | 12470.9 |
| protein of unknown function duf6 transmembrane | AfiDRAFT_2851 | Not Available | - | 2971161 - 2971994 | 29317.7 |
| conserved hypothetical protein | AfiDRAFT_2852 | Not Available | - | 2972076 - 2972396 | 11225.0 |
| protein of unknown function duf202 | AfiDRAFT_2853 | Not Available | - | 2972411 - 2972815 | 14848.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
