Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | AfiDRAFT_2834 | Not Available | - | 2954446 - 2955354 | 33688.6 |
| capsular polysaccharide biosynthesis protein-like protein | AfiDRAFT_2835 | Not Available | - | 2955351 - 2957345 | 74191.8 |
| amidase | AfiDRAFT_2836 | Not Available | + | 2957912 - 2959138 | 44511.9 |
| fmn-dependent alpha-hydroxy acid dehydrogenase | AfiDRAFT_2837 | Not Available | - | 2959169 - 2960317 | 41946.0 |
| serine--glyoxylate aminotransferase (sgat) | AfiDRAFT_2838 | Not Available | + | 2960982 - 2961163 | 6509.93 |
| serine--glyoxylate aminotransferase (sgat) | AfiDRAFT_2839 | Not Available | + | 2961164 - 2961421 | 8935.12 |
| conserved hypothetical protein | AfiDRAFT_2840 | Not Available | + | 2961497 - 2962567 | 39185.6 |
| hypothetical protein | AfiDRAFT_2841 | Not Available | - | 2963092 - 2963217 | 4468.04 |
| sira domain protein | AfiDRAFT_2842 | Not Available | + | 2963468 - 2963710 | 9297.17 |
| dsre family protein | AfiDRAFT_2843 | Not Available | + | 2963779 - 2964141 | 12672.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
