Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bluf domain protein | AfiDRAFT_2814 | Not Available | - | 2936932 - 2937387 | 17049.4 |
| diguanylate phosphodiesterase | AfiDRAFT_2815 | Not Available | - | 2937437 - 2938210 | 28552.6 |
| hypothetical protein | AfiDRAFT_2816 | Not Available | + | 2938826 - 2939071 | 9224.94 |
| protein of unknown function duf2177, membrane | AfiDRAFT_2817 | Not Available | + | 2939676 - 2940086 | 14615.9 |
| conserved hypothetical protein | AfiDRAFT_2818 | Not Available | - | 2940070 - 2940639 | 20602.3 |
| methyltransferase type 11 | AfiDRAFT_2819 | Not Available | - | 2940654 - 2941682 | 39088.5 |
| protein of unknown function duf1295 | AfiDRAFT_2820 | Not Available | - | 2941679 - 2942512 | 30495.1 |
| alpha/beta hydrolase fold-3 domain protein | AfiDRAFT_2821 | Not Available | - | 2942509 - 2943366 | 31206.7 |
| anti-ecfsigma factor, chrr | AfiDRAFT_2822 | Not Available | - | 2943394 - 2944044 | 23541.5 |
| rna polymerase, sigma-24 subunit, ecf subfamily | AfiDRAFT_2823 | Not Available | - | 2944041 - 2944622 | 21592.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
