Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiol:disulfide interchange protein-like protein | AfiDRAFT_2774 | Not Available | - | 2901367 - 2901777 | 14825.0 |
| erfk/ybis/ycfs/ynhg family protein | AfiDRAFT_2775 | Not Available | - | 2901962 - 2902753 | 28584.1 |
| transglutaminase family protein cysteine peptidase btlcp | AfiDRAFT_2776 | Not Available | - | 2902838 - 2903470 | 23598.9 |
| dsba oxidoreductase | AfiDRAFT_2777 | Not Available | - | 2903630 - 2904388 | 27732.2 |
| integral membrane sensor signal transduction histidine kinase | AfiDRAFT_2778 | Not Available | - | 2904443 - 2905834 | 51058.0 |
| two component transcriptional regulator, winged helix family | AfiDRAFT_2779 | Not Available | - | 2905831 - 2906493 | 24089.1 |
| pentapeptide mxkdx repeat protein | AfiDRAFT_2780 | Not Available | - | 2906795 - 2907046 | 9223.26 |
| protein of unknown function duf1223 | AfiDRAFT_2781 | Not Available | - | 2907131 - 2907853 | 25928.8 |
| rna polymerase, sigma-24 subunit, ecf subfamily | AfiDRAFT_2782 | Not Available | + | 2908025 - 2908552 | 20287.5 |
| protein of unknown function duf1109 | AfiDRAFT_2783 | Not Available | + | 2908549 - 2909202 | 22969.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
