Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance protein | AfiDRAFT_2704 | Not Available | + | 2818241 - 2818399 | 5777.22 |
| putative abc transporter periplasmic substrate-binding protein | AfiDRAFT_2705 | Not Available | + | 2818766 - 2819773 | 36765.4 |
| conserved hypothetical protein | AfiDRAFT_2706 | Not Available | - | 2819975 - 2820814 | 31247.6 |
| glucose-methanol-choline oxidoreductase | AfiDRAFT_2707 | Not Available | - | 2820811 - 2822457 | 59823.8 |
| l-carnitine dehydratase/bile acid-inducible protein f | AfiDRAFT_2708 | Not Available | - | 2822687 - 2823967 | 46754.9 |
| abc transporter related protein | AfiDRAFT_2709 | Not Available | + | 2824223 - 2825383 | 42751.5 |
| extracellular solute-binding protein family 1 | AfiDRAFT_2710 | Not Available | + | 2825343 - 2826704 | 51016.6 |
| binding-protein-dependent transport systems inner membrane component | AfiDRAFT_2711 | Not Available | + | 2826734 - 2827606 | 31920.8 |
| binding-protein-dependent transport systems inner membrane component | AfiDRAFT_2712 | Not Available | + | 2827609 - 2828577 | 35059.7 |
| gntr domain protein | AfiDRAFT_2713 | Not Available | - | 2828690 - 2829418 | 27823.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
