Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atpase, flii/yscn family | AfiDRAFT_2686 | Not Available | + | 2795575 - 2796900 | 47177.0 |
| flagellar export protein flij | AfiDRAFT_2687 | Not Available | + | 2797007 - 2797426 | 16141.1 |
| rna polymerase, sigma-24 subunit, ecf subfamily | AfiDRAFT_2688 | Not Available | + | 2797596 - 2798141 | 20239.4 |
| anti-sigma k factor rska | AfiDRAFT_2689 | Not Available | + | 2798138 - 2799097 | 33139.3 |
| conserved hypothetical protein | AfiDRAFT_2690 | Not Available | - | 2799269 - 2799481 | 7307.01 |
| flagellar biosynthesis protein flha | AfiDRAFT_2691 | Not Available | - | 2799795 - 2801924 | 75446.5 |
| Trna-met | Not Available | Not Available | + | 2802279 - 2802354 | Not Available |
| integrase family protein | AfiDRAFT_2692 | Not Available | - | 2802369 - 2803571 | 45173.1 |
| hypothetical protein | AfiDRAFT_2693 | Not Available | - | 2804041 - 2804844 | 30833.4 |
| resolvase domain protein | AfiDRAFT_2694 | Not Available | + | 2805302 - 2805982 | 24762.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
