Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mt-a70 family protein | AfiDRAFT_2598 | Not Available | + | 2708686 - 2709324 | 24033.8 |
| excinuclease abc, b subunit | AfiDRAFT_2599 | Not Available | - | 2709326 - 2712205 | 106768.0 |
| conserved hypothetical protein | AfiDRAFT_2600 | Not Available | - | 2712245 - 2713300 | 38346.3 |
| glutathione s-transferase domain protein | AfiDRAFT_2601 | Not Available | + | 2713498 - 2714196 | 26744.3 |
| glutathione s-transferase domain protein | AfiDRAFT_2602 | Not Available | + | 2714196 - 2714891 | 26403.6 |
| protein of unknown function duf1800 | AfiDRAFT_2603 | Not Available | + | 2715211 - 2716614 | 50469.3 |
| protein of unknown function duf1501 | AfiDRAFT_2604 | Not Available | + | 2716618 - 2717853 | 43203.8 |
| phospholipid/glycerol acyltransferase | AfiDRAFT_2605 | Not Available | - | 2717857 - 2718636 | 28198.7 |
| protein of unknown function duf486 | AfiDRAFT_2606 | Not Available | + | 2718908 - 2719258 | 13027.2 |
| hypothetical protein | AfiDRAFT_2607 | Not Available | - | 2719198 - 2719404 | 7109.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
