Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein omp31 | AfiDRAFT_2568 | Not Available | - | 2681667 - 2682296 | 22293.0 |
| excinuclease abc, c subunit | AfiDRAFT_2569 | Not Available | + | 2682544 - 2684595 | 75370.1 |
| cdp-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase | AfiDRAFT_2570 | Not Available | + | 2684679 - 2685290 | 22445.8 |
| molybdopterin converting factor, subunit 1 | AfiDRAFT_2571 | Not Available | + | 2685290 - 2685541 | 9178.1 |
| molybdopterin biosynthesis moae protein | AfiDRAFT_2572 | Not Available | + | 2685551 - 2686024 | 17638.9 |
| protein-(glutamine-n5) methyltransferase, ribosomal protein l3-specific | AfiDRAFT_2573 | Not Available | + | 2686024 - 2687001 | 35240.3 |
| cmp/dcmp deaminase zinc-binding | AfiDRAFT_2574 | Not Available | + | 2687023 - 2687487 | 16593.9 |
| mate efflux family protein | AfiDRAFT_2575 | Not Available | + | 2687586 - 2688998 | 50692.4 |
| branched-chain amino acid aminotransferase | AfiDRAFT_2576 | Not Available | - | 2689036 - 2690148 | 40100.9 |
| transcriptional regulator, marr family | AfiDRAFT_2577 | Not Available | + | 2690388 - 2690927 | 20205.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
