Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tade family protein | AfiDRAFT_2558 | Not Available | + | 2674070 - 2674507 | 15415.6 |
| protein of unknown function duf2134, membrane | AfiDRAFT_2559 | Not Available | + | 2674507 - 2676150 | 55537.6 |
| histidyl-trna synthetase | AfiDRAFT_2560 | Not Available | + | 2676220 - 2677758 | 57080.8 |
| 4-oxalocrotonate tautomerase | AfiDRAFT_2561 | Not Available | + | 2677770 - 2677967 | 7150.88 |
| conserved hypothetical protein | AfiDRAFT_2562 | Not Available | - | 2677975 - 2678535 | 19843.8 |
| conserved hypothetical protein | AfiDRAFT_2563 | Not Available | - | 2678561 - 2678863 | 10692.0 |
| conserved hypothetical protein | AfiDRAFT_2564 | Not Available | + | 2679069 - 2679515 | 16256.1 |
| ribonuclease t2 | AfiDRAFT_2565 | Not Available | + | 2679607 - 2680308 | 25772.0 |
| protein of unknown function duf519 | AfiDRAFT_2566 | Not Available | + | 2680376 - 2681239 | 32013.4 |
| cold-shock dna-binding domain protein | AfiDRAFT_2567 | Not Available | + | 2681377 - 2681592 | 7679.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
