Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function duf2093 | AfiDRAFT_2538 | Not Available | - | 2649510 - 2649770 | 9490.37 |
| nitrite reductase, copper-containing protein | AfiDRAFT_2539 | Not Available | - | 2649865 - 2652033 | 75018.0 |
| exodeoxyribonuclease vii, large subunit | AfiDRAFT_2540 | Not Available | - | 2652208 - 2653650 | 52365.2 |
| phosphoribosylamine/glycine ligase | AfiDRAFT_2541 | Not Available | + | 2653732 - 2654997 | 44265.2 |
| gcn5-related n-acetyltransferase | AfiDRAFT_2542 | Not Available | + | 2654997 - 2655443 | 16789.3 |
| cmp/dcmp deaminase zinc-binding | AfiDRAFT_2543 | Not Available | - | 2655456 - 2655902 | 15885.1 |
| rna-binding s4 domain protein | AfiDRAFT_2544 | Not Available | + | 2656042 - 2658129 | 79315.5 |
| methyltransferase | AfiDRAFT_2545 | Not Available | + | 2658132 - 2658689 | 20035.1 |
| dna mismatch repair protein mutl | AfiDRAFT_2546 | Not Available | - | 2658693 - 2660489 | 64852.5 |
| class i peptide chain release factor | AfiDRAFT_2547 | Not Available | - | 2660568 - 2660984 | 15599.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
