Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein tolr | AfiDRAFT_2498 | Not Available | + | 2605989 - 2606441 | 15916.7 |
| protein tola | AfiDRAFT_2499 | Not Available | + | 2606443 - 2607384 | 34853.7 |
| tol-pal system beta propeller repeat protein tolb | AfiDRAFT_2500 | Not Available | + | 2607423 - 2608766 | 48570.5 |
| peptidoglycan-associated lipoprotein | AfiDRAFT_2501 | Not Available | + | 2609001 - 2609489 | 17850.2 |
| tol-pal system protein ybgf | AfiDRAFT_2502 | Not Available | + | 2609630 - 2610661 | 36723.9 |
| trna(ile)-lysidine synthetase | AfiDRAFT_2503 | Not Available | + | 2610636 - 2611679 | 37552.6 |
| atp-dependent metalloprotease ftsh | AfiDRAFT_2504 | Not Available | + | 2611877 - 2613793 | 69934.5 |
| major facilitator superfamily mfs_1 | AfiDRAFT_2505 | Not Available | + | 2613920 - 2615095 | 40522.8 |
| transcriptional regulator, tetr family | AfiDRAFT_2506 | Not Available | + | 2615225 - 2615899 | 23313.4 |
| fad linked oxidase domain protein | AfiDRAFT_2507 | Not Available | + | 2616126 - 2617619 | 53603.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
