Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function duf179 | AfiDRAFT_2468 | Not Available | + | 2576387 - 2577040 | 23198.5 |
| diguanylate cyclase/phosphodiesterase with pas/pac and periplasmic/7tm domain sensor(s) | AfiDRAFT_2469 | Not Available | - | 2577060 - 2580047 | 109128.0 |
| nad(p)h quinone oxidoreductase, pig3 family | AfiDRAFT_2470 | Not Available | - | 2580155 - 2581153 | 34926.5 |
| protein of unknown function duf1192 | AfiDRAFT_2471 | Not Available | + | 2581295 - 2581486 | 7139.47 |
| protein of unknown function duf1465 | AfiDRAFT_2472 | Not Available | + | 2581819 - 2582325 | 18601.3 |
| ribosomal protein l31 | AfiDRAFT_2473 | Not Available | - | 2582409 - 2582636 | 8504.04 |
| lipid a abc exporter family, fused atpase and inner membrane subunits | AfiDRAFT_2474 | Not Available | + | 2582817 - 2584664 | 65992.9 |
| gcn5-related n-acetyltransferase | AfiDRAFT_2475 | Not Available | - | 2584661 - 2585113 | 16901.7 |
| ompa/motb domain protein | AfiDRAFT_2476 | Not Available | - | 2585110 - 2586126 | 37273.4 |
| mota/tolq/exbb proton channel family | AfiDRAFT_2477 | Not Available | - | 2586131 - 2587138 | 36327.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
