Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit iii | AfiDRAFT_2380 | Not Available | + | 2486526 - 2487383 | 32132.0 |
| protein of unknown function duf983 | AfiDRAFT_2381 | Not Available | + | 2487614 - 2487919 | 11124.9 |
| surfeit locus 1 family protein | AfiDRAFT_2382 | Not Available | + | 2487916 - 2488668 | 27730.3 |
| threonine synthase | AfiDRAFT_2383 | Not Available | + | 2488794 - 2490209 | 50799.7 |
| processing peptidase | AfiDRAFT_2384 | Not Available | + | 2490209 - 2491498 | 46246.1 |
| ribosomal-protein-alanine n-acetyltransferase | AfiDRAFT_2385 | Not Available | + | 2491607 - 2492194 | 22438.3 |
| putative lipoprotein | AfiDRAFT_2386 | Not Available | + | 2492337 - 2493029 | 23601.2 |
| h+transporting two-sector atpase b/b' subunit | AfiDRAFT_2387 | Not Available | - | 2493112 - 2493597 | 17455.8 |
| h+transporting two-sector atpase b/b' subunit | AfiDRAFT_2388 | Not Available | - | 2493602 - 2494156 | 19687.3 |
| h+transporting two-sector atpase c subunit | AfiDRAFT_2389 | Not Available | - | 2494222 - 2494449 | 7562.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
