Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate/cysteine ligase | AfiDRAFT_2370 | Not Available | + | 2476686 - 2478056 | 51061.2 |
| apple domain-containing protein | AfiDRAFT_2371 | Not Available | + | 2478201 - 2478785 | 21411.6 |
| signal peptidase i | AfiDRAFT_2372 | Not Available | - | 2478795 - 2479562 | 27385.6 |
| peptidase u62 modulator of dna gyrase | AfiDRAFT_2373 | Not Available | - | 2479559 - 2480986 | 50735.9 |
| invasion associated locus b family protein | AfiDRAFT_2374 | Not Available | - | 2481114 - 2481650 | 18751.1 |
| cytochrome c oxidase, subunit ii | AfiDRAFT_2375 | Not Available | + | 2482088 - 2482933 | 31453.7 |
| cytochrome c oxidase, subunit i | AfiDRAFT_2376 | Not Available | + | 2482998 - 2484623 | 59552.4 |
| protoheme ix farnesyltransferase | AfiDRAFT_2377 | Not Available | + | 2484736 - 2485677 | 33693.0 |
| conserved hypothetical protein | AfiDRAFT_2378 | Not Available | + | 2485685 - 2485852 | 6073.66 |
| cytochrome c oxidase assembly protein ctag/cox11 | AfiDRAFT_2379 | Not Available | + | 2485854 - 2486471 | 22600.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
