Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| erfk/ybis/ycfs/ynhg family protein | AfiDRAFT_2331 | Not Available | - | 2434895 - 2435506 | 22443.1 |
| cytochrome d ubiquinol oxidase, subunit ii | AfiDRAFT_2332 | Not Available | - | 2435745 - 2436758 | 37104.9 |
| cytochrome bd ubiquinol oxidase subunit i | AfiDRAFT_2333 | Not Available | - | 2436755 - 2438176 | 52278.1 |
| polysaccharide deacetylase | AfiDRAFT_2334 | Not Available | - | 2438280 - 2439338 | 38913.6 |
| ompa/motb domain protein | AfiDRAFT_2335 | Not Available | + | 2439501 - 2440895 | 49548.5 |
| ompa/motb domain protein | AfiDRAFT_2336 | Not Available | + | 2440899 - 2441207 | 10990.6 |
| conserved hypothetical protein | AfiDRAFT_2337 | Not Available | + | 2441317 - 2442348 | 37622.7 |
| integral membrane sensor signal transduction histidine kinase | AfiDRAFT_2338 | Not Available | + | 2442363 - 2443664 | 47058.2 |
| phosphate abc transporter, periplasmic phosphate-binding protein | AfiDRAFT_2339 | Not Available | + | 2443795 - 2444820 | 36254.2 |
| phosphate abc transporter, inner membrane subunit pstc | AfiDRAFT_2340 | Not Available | + | 2444934 - 2445923 | 34909.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
