Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | AfiDRAFT_2262 | Not Available | + | 2351226 - 2352377 | 40976.7 |
| conserved hypothetical protein | AfiDRAFT_2263 | Not Available | + | 2352424 - 2352852 | 15226.2 |
| glycoside hydrolase, family 17 | AfiDRAFT_2264 | Not Available | - | 2352800 - 2354428 | 59435.6 |
| conserved hypothetical protein | AfiDRAFT_2265 | Not Available | + | 2354708 - 2355244 | 19087.6 |
| glycosyl transferase family 2 | AfiDRAFT_2266 | Not Available | + | 2355418 - 2358072 | 97861.2 |
| major facilitator superfamily mfs_1 | AfiDRAFT_2267 | Not Available | + | 2358371 - 2359705 | 47563.4 |
| hypothetical protein | AfiDRAFT_2268 | Not Available | + | 2359873 - 2360166 | 10936.4 |
| heavy metal efflux pump, czca family | AfiDRAFT_2269 | Not Available | - | 2360295 - 2363486 | 113864.0 |
| efflux transporter, rnd family, mfp subunit | AfiDRAFT_2270 | Not Available | - | 2363479 - 2364456 | 34970.8 |
| outer membrane efflux protein | AfiDRAFT_2271 | Not Available | - | 2364453 - 2365724 | 45881.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
