Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amp-dependent synthetase and ligase | AfiDRAFT_2252 | Not Available | + | 2336895 - 2338433 | 54863.6 |
| putative diguanylate cyclase | AfiDRAFT_2253 | Not Available | + | 2338533 - 2339774 | 43451.4 |
| prc-barrel domain protein | AfiDRAFT_2254 | Not Available | + | 2339851 - 2340291 | 15190.0 |
| transcription-repair coupling factor | AfiDRAFT_2255 | Not Available | - | 2340346 - 2343864 | 129745.0 |
| protein of unknown function duf339 | AfiDRAFT_2256 | Not Available | - | 2343861 - 2344265 | 15472.0 |
| dead/deah box helicase domain protein | AfiDRAFT_2257 | Not Available | + | 2344344 - 2346452 | 76873.3 |
| conserved hypothetical protein | AfiDRAFT_2258 | Not Available | - | 2346461 - 2346817 | 12795.8 |
| protein of unknown function duf502 | AfiDRAFT_2259 | Not Available | - | 2346818 - 2347588 | 27517.6 |
| glucosamine/fructose-6-phosphate aminotransferase, isomerizing | AfiDRAFT_2260 | Not Available | - | 2347699 - 2349525 | 65833.2 |
| udp-n-acetylglucosamine pyrophosphorylase | AfiDRAFT_2261 | Not Available | - | 2349667 - 2351022 | 47886.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
