Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thymidylate kinase | AfiDRAFT_2213 | Not Available | - | 2291359 - 2292057 | 24796.6 |
| serine-type d-ala-d-ala carboxypeptidase | AfiDRAFT_2214 | Not Available | - | 2292061 - 2293287 | 43671.3 |
| rare lipoprotein a | AfiDRAFT_2215 | Not Available | - | 2293407 - 2294297 | 31378.3 |
| protein of unknown function duf2478 | AfiDRAFT_2216 | Not Available | + | 2294452 - 2294982 | 18347.9 |
| Trna-ser | Not Available | Not Available | + | 2294995 - 2295084 | Not Available |
| conserved hypothetical protein | AfiDRAFT_2217 | Not Available | + | 2295233 - 2295490 | 8598.39 |
| abc transporter related protein | AfiDRAFT_2218 | Not Available | - | 2295554 - 2296648 | 39493.7 |
| binding-protein-dependent transport systems inner membrane component | AfiDRAFT_2219 | Not Available | - | 2296658 - 2298400 | 62710.9 |
| extracellular solute-binding protein family 1 | AfiDRAFT_2220 | Not Available | - | 2298414 - 2299757 | 48195.2 |
| transporter, hydrophobe/amphiphile efflux-1 (hae1) family | AfiDRAFT_2221 | Not Available | - | 2299924 - 2303085 | 112154.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
