Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase, wecb/taga/cpsf family | AfiDRAFT_2193 | Not Available | - | 2269363 - 2270160 | 29234.6 |
| endo-1,4-beta-xylanase | AfiDRAFT_2194 | Not Available | + | 2270326 - 2271426 | 41168.9 |
| polysaccharide biosynthesis protein | AfiDRAFT_2195 | Not Available | - | 2271428 - 2272870 | 51695.5 |
| acyltransferase 3 | AfiDRAFT_2196 | Not Available | - | 2272873 - 2273922 | 38299.9 |
| glycosyl transferase group 1 | AfiDRAFT_2197 | Not Available | - | 2273951 - 2275036 | 40199.5 |
| conserved hypothetical protein | AfiDRAFT_2198 | Not Available | - | 2275047 - 2276453 | 51618.1 |
| capsular exopolysaccharide family | AfiDRAFT_2199 | Not Available | - | 2276450 - 2278771 | 84065.9 |
| protein of unknown function duf2320 | AfiDRAFT_2200 | Not Available | - | 2278752 - 2280164 | 51531.5 |
| polysaccharide export protein | AfiDRAFT_2201 | Not Available | - | 2280422 - 2280991 | 20845.1 |
| metallophosphoesterase | AfiDRAFT_2202 | Not Available | - | 2281074 - 2281553 | 17755.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
