Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| valyl-trna synthetase | AfiDRAFT_2173 | Not Available | + | 2246603 - 2249473 | 107656.0 |
| dna-3-methyladenine glycosylase | AfiDRAFT_2174 | Not Available | - | 2249487 - 2250185 | 25050.5 |
| lipoic acid synthetase | AfiDRAFT_2175 | Not Available | + | 2250242 - 2251210 | 35760.8 |
| cyclase/dehydrase | AfiDRAFT_2176 | Not Available | + | 2251210 - 2251677 | 17874.5 |
| cina domain protein | AfiDRAFT_2177 | Not Available | - | 2251556 - 2252182 | 22033.8 |
| 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | AfiDRAFT_2178 | Not Available | - | 2252184 - 2253383 | 41828.8 |
| tim-barrel protein, nifr3 family | AfiDRAFT_2179 | Not Available | + | 2253609 - 2254643 | 36181.6 |
| signal transduction histidine kinase, nitrogen specific, ntrb | AfiDRAFT_2180 | Not Available | + | 2254640 - 2255797 | 41720.2 |
| two component, sigma54 specific, transcriptional regulator, fis family | AfiDRAFT_2181 | Not Available | + | 2255807 - 2257252 | 53063.3 |
| multi-sensor signal transduction histidine kinase | AfiDRAFT_2182 | Not Available | + | 2257403 - 2259682 | 83481.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
