Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, rnd family, mfp subunit | AfiDRAFT_2165 | Not Available | + | 2234187 - 2235449 | 44558.1 |
| acriflavin resistance protein | AfiDRAFT_2166 | Not Available | + | 2235461 - 2238610 | 112077.0 |
| acriflavin resistance protein | AfiDRAFT_2167 | Not Available | + | 2238611 - 2241718 | 110422.0 |
| dtw domain containing protein | AfiDRAFT_2168 | Not Available | + | 2241772 - 2242506 | 27341.4 |
| Trna-asn | Not Available | Not Available | + | 2242562 - 2242636 | Not Available |
| Trna-cys | Not Available | Not Available | + | 2242795 - 2242868 | Not Available |
| methyl-accepting chemotaxis protein | AfiDRAFT_2169 | Not Available | - | 2242931 - 2243179 | 8846.57 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | AfiDRAFT_2170 | Not Available | + | 2243364 - 2244026 | 22931.7 |
| type i secretion outer membrane protein, tolc family | AfiDRAFT_2171 | Not Available | + | 2244233 - 2245645 | 50670.8 |
| protein of unknown function duf2497 | AfiDRAFT_2172 | Not Available | + | 2245803 - 2246462 | 22724.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
