Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 2 | AfiDRAFT_2155 | Not Available | + | 2223042 - 2223776 | 27100.6 |
| lipid a biosynthesis domain protein | AfiDRAFT_2156 | Not Available | + | 2223776 - 2224114 | 12834.0 |
| cystathionine beta-lyase | AfiDRAFT_2157 | Not Available | - | 2224118 - 2225326 | 42935.2 |
| cationic amino acid abc transporter, periplasmic binding protein | AfiDRAFT_2158 | Not Available | + | 2225504 - 2226523 | 37160.4 |
| polar amino acid abc transporter, inner membrane subunit | AfiDRAFT_2159 | Not Available | + | 2226539 - 2227744 | 43024.4 |
| polar amino acid abc transporter, inner membrane subunit | AfiDRAFT_2160 | Not Available | + | 2227741 - 2229105 | 49721.1 |
| abc transporter related protein | AfiDRAFT_2161 | Not Available | + | 2229119 - 2229859 | 27876.0 |
| pyridoxal-5'-phosphate-dependent protein beta subunit | AfiDRAFT_2162 | Not Available | - | 2229875 - 2230912 | 36740.2 |
| cyclopropane-fatty-acyl-phospholipid synthase | AfiDRAFT_2163 | Not Available | - | 2231029 - 2232195 | 44883.6 |
| rnd efflux system, outer membrane lipoprotein, nodt family | AfiDRAFT_2164 | Not Available | + | 2232701 - 2234197 | 53776.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
