Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cold-shock dna-binding domain protein | AfiDRAFT_2137 | Not Available | + | 2195125 - 2195847 | 25975.9 |
| protein of unknown function duf192 | AfiDRAFT_2138 | Not Available | + | 2195980 - 2196459 | 17154.9 |
| Trna-pro | Not Available | Not Available | + | 2196515 - 2196591 | Not Available |
| putative lipoprotein | AfiDRAFT_2139 | Not Available | - | 2196802 - 2197191 | 13776.7 |
| von willebrand factor type a | AfiDRAFT_2140 | Not Available | + | 2197429 - 2206152 | 296548.0 |
| transglutaminase family protein cysteine peptidase btlcp | AfiDRAFT_2141 | Not Available | - | 2206217 - 2207248 | 36296.8 |
| type i secretion membrane fusion protein, hlyd family | AfiDRAFT_2142 | Not Available | - | 2207484 - 2208737 | 46265.8 |
| type i secretion system atpase | AfiDRAFT_2143 | Not Available | - | 2208724 - 2210964 | 80984.0 |
| type i secretion outer membrane protein, tolc family | AfiDRAFT_2144 | Not Available | - | 2211153 - 2212835 | 61071.8 |
| conserved hypothetical protein | AfiDRAFT_2145 | Not Available | - | 2213166 - 2213627 | 16447.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
