Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein, 1a family | AfiDRAFT_2098 | Not Available | + | 2150300 - 2152789 | 90875.3 |
| peptide chain release factor 2 | AfiDRAFT_2099 | Not Available | + | 2153045 - 2154013 | 35597.7 |
| bifunctional deaminase-reductase domain protein | AfiDRAFT_2100 | Not Available | + | 2154036 - 2154695 | 23738.4 |
| peptidase m23 | AfiDRAFT_2101 | Not Available | - | 2154712 - 2156058 | 49396.6 |
| alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen | AfiDRAFT_2102 | Not Available | - | 2156129 - 2156722 | 21221.8 |
| conserved hypothetical protein | AfiDRAFT_2103 | Not Available | + | 2156986 - 2160564 | 126627.0 |
| tyrosyl-trna synthetase | AfiDRAFT_2104 | Not Available | - | 2160579 - 2161832 | 45967.4 |
| protein of unknown function upf0075 | AfiDRAFT_2105 | Not Available | + | 2161915 - 2163012 | 38498.7 |
| alpha/beta hydrolase fold protein | AfiDRAFT_2106 | Not Available | - | 2163018 - 2163665 | 23916.8 |
| cysteine desulfurase | AfiDRAFT_2107 | Not Available | + | 2163870 - 2165051 | 40712.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
