Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, rnd family, mfp subunit | AfiDRAFT_2068 | Not Available | + | 2112375 - 2113580 | 43369.9 |
| transporter, hydrophobe/amphiphile efflux-1 (hae1) family | AfiDRAFT_2069 | Not Available | + | 2113577 - 2116744 | 113742.0 |
| conserved hypothetical protein | AfiDRAFT_2070 | Not Available | + | 2116804 - 2116953 | 5910.16 |
| short-chain dehydrogenase/reductase sdr | AfiDRAFT_2071 | Not Available | - | 2116957 - 2117637 | 23211.8 |
| conserved hypothetical protein | AfiDRAFT_2072 | Not Available | - | 2117676 - 2118296 | 22515.1 |
| pentapeptide mxkdx repeat protein | AfiDRAFT_2073 | Not Available | + | 2118587 - 2118829 | 8581.58 |
| conserved hypothetical protein | AfiDRAFT_2074 | Not Available | - | 2118884 - 2119744 | 30295.7 |
| hypothetical protein | AfiDRAFT_2075 | Not Available | + | 2120124 - 2120429 | 10678.8 |
| putative lipoprotein | AfiDRAFT_2076 | Not Available | + | 2120534 - 2120755 | 7478.19 |
| two component, sigma54 specific, transcriptional regulator, fis family | AfiDRAFT_2077 | Not Available | - | 2120819 - 2122189 | 51170.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
