Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | AfiDRAFT_1978 | Not Available | + | 2018086 - 2018982 | 32637.7 |
| abc transporter related protein | AfiDRAFT_1979 | Not Available | - | 2018994 - 2020811 | 66052.7 |
| protein of unknown function duf188 | AfiDRAFT_1980 | Not Available | - | 2020817 - 2021320 | 18178.8 |
| ppx/gppa phosphatase | AfiDRAFT_1981 | Not Available | + | 2021470 - 2022522 | 37503.0 |
| ribosomal rna methyltransferase rrmj/ftsj | AfiDRAFT_1982 | Not Available | + | 2022566 - 2023246 | 24365.4 |
| sulfatase | AfiDRAFT_1983 | Not Available | - | 2023281 - 2024939 | 61115.4 |
| major facilitator superfamily mfs_1 | AfiDRAFT_1984 | Not Available | - | 2024914 - 2026377 | 51670.4 |
| inosine-5'-monophosphate dehydrogenase | AfiDRAFT_1985 | Not Available | + | 2026711 - 2028207 | 52603.4 |
| protein of unknown function duf1123 | AfiDRAFT_1986 | Not Available | + | 2028286 - 2028648 | 13285.8 |
| fmu (sun) domain protein | AfiDRAFT_1987 | Not Available | + | 2028665 - 2029966 | 45790.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
