Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative parb-like nuclease | AfiDRAFT_1959 | Not Available | + | 1994492 - 1995115 | 24041.2 |
| mgtc/sapb transporter | AfiDRAFT_1960 | Not Available | - | 1995150 - 1995608 | 15510.4 |
| protein of unknown function duf87 | AfiDRAFT_1961 | Not Available | - | 1995615 - 1997393 | 65344.6 |
| Trna-gln | Not Available | Not Available | + | 1997757 - 1997830 | Not Available |
| conserved hypothetical protein | AfiDRAFT_1962 | Not Available | - | 1997933 - 1998937 | 35459.8 |
| efflux transporter, rnd family, mfp subunit | AfiDRAFT_1963 | Not Available | + | 1999124 - 2000413 | 46048.6 |
| conserved hypothetical protein | AfiDRAFT_1964 | Not Available | + | 2000509 - 2000703 | 6733.33 |
| tonb-dependent siderophore receptor | AfiDRAFT_1965 | Not Available | + | 2001107 - 2003476 | 86609.7 |
| pepsy-associated tm helix domain protein | AfiDRAFT_1966 | Not Available | + | 2003489 - 2004643 | 42779.7 |
| conserved hypothetical protein | AfiDRAFT_1967 | Not Available | + | 2004640 - 2004849 | 7450.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
