Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyruvate kinase | AfiDRAFT_1889 | Not Available | + | 1918924 - 1920333 | 50091.0 |
| fumarylacetoacetate (faa) hydrolase | AfiDRAFT_1890 | Not Available | + | 1920374 - 1921147 | 27704.2 |
| transcriptional regulator, gntr family | AfiDRAFT_1891 | Not Available | - | 1921239 - 1921976 | 27380.1 |
| succinyl-coa synthetase, alpha subunit | AfiDRAFT_1892 | Not Available | - | 1922111 - 1923019 | 30861.5 |
| succinyl-coa synthetase, beta subunit | AfiDRAFT_1893 | Not Available | - | 1923024 - 1924220 | 42285.3 |
| coa-binding domain protein | AfiDRAFT_1894 | Not Available | - | 1924233 - 1926365 | 75016.1 |
| major facilitator superfamily mfs_1 | AfiDRAFT_1895 | Not Available | - | 1926690 - 1927994 | 46621.2 |
| oxalyl-coa decarboxylase | AfiDRAFT_1896 | Not Available | + | 1928652 - 1930391 | 61076.1 |
| formyl-coa transferase | AfiDRAFT_1897 | Not Available | + | 1930468 - 1931742 | 46232.5 |
| extracellular ligand-binding receptor | AfiDRAFT_1898 | Not Available | + | 1931985 - 1933208 | 43887.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
