Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hopanoid biosynthesis associated rnd transporter like protein hpnn | AfiDRAFT_1779 | Not Available | + | 1813043 - 1815625 | 92478.8 |
| protein of unknown function duf2147 | AfiDRAFT_1780 | Not Available | - | 1815575 - 1816201 | 21537.9 |
| aminotransferase class-iii | AfiDRAFT_1781 | Not Available | + | 1816325 - 1817716 | 50612.5 |
| short-chain dehydrogenase/reductase sdr | AfiDRAFT_1782 | Not Available | - | 1817866 - 1818618 | 26510.7 |
| cysteine rich repeat protein | AfiDRAFT_1783 | Not Available | - | 1818763 - 1818999 | 8374.22 |
| glucose-methanol-choline oxidoreductase | AfiDRAFT_1784 | Not Available | - | 1819157 - 1820776 | 59440.9 |
| amidohydrolase | AfiDRAFT_1785 | Not Available | + | 1820905 - 1822080 | 41524.7 |
| efflux transporter, rnd family, mfp subunit | AfiDRAFT_1786 | Not Available | + | 1822320 - 1823573 | 44777.4 |
| heavy metal efflux pump, czca family | AfiDRAFT_1787 | Not Available | + | 1823692 - 1826823 | 112744.0 |
| type i secretion outer membrane protein, tolc family | AfiDRAFT_1788 | Not Available | - | 1826837 - 1828195 | 48257.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
