Afipia sp. 1NLS2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia sp. 1NLS2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Afipia sp. 1NLS2

Accession NumberADVZ00000000.1

Gene Summary

Adenine Count

769968 bp

Thymine Count

767149 bp

Guanine Count

1216555 bp

Cytosine Count

1218084 bp

Genome Length

3971756 bp

Protein-coding Genes

3804 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
radical sam domain proteinAfiDRAFT_1769Not Available+1800241 - 180183059909.1
squalene synthase hpncAfiDRAFT_1770Not Available+1802019 - 180289732229.8
squalene synthase hpndAfiDRAFT_1771Not Available+1802905 - 180373230656.1
squalene-associated fad-dependent desaturaseAfiDRAFT_1772Not Available+1803732 - 180499745405.1
squalene-hopene cyclaseAfiDRAFT_1773Not Available+1805008 - 180696973341.7
hopanoid-associated phosphorylaseAfiDRAFT_1774Not Available+1806975 - 180769425244.5
hypothetical proteinAfiDRAFT_1775Not Available+1807813 - 180862229441.0
hopanoid biosynthesis associated radical sam protein hpnhAfiDRAFT_1776Not Available-1808714 - 180990444065.2
hydroxymethylbutenyl pyrophosphate reductaseAfiDRAFT_1777Not Available-1809923 - 181092435824.1
deoxyxylulose-5-phosphate synthaseAfiDRAFT_1778Not Available-1810890 - 181280668060.7

Displaying genes 1821 – 1830 of 3877 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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