Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transposase is3/is911 family protein | AfiDRAFT_1749 | Not Available | + | 1779411 - 1779626 | 7977.57 |
| integrase catalytic region | AfiDRAFT_1750 | Not Available | + | 1780112 - 1780489 | 14132.7 |
| conserved hypothetical protein | AfiDRAFT_1751 | Not Available | - | 1780756 - 1781169 | 14811.1 |
| serine--glyoxylate aminotransferase (sgat) | AfiDRAFT_1752 | Not Available | + | 1781172 - 1781429 | 8921.09 |
| hypothetical protein | AfiDRAFT_1753 | Not Available | + | 1781487 - 1781624 | 5243.54 |
| aminotransferase class v | AfiDRAFT_1754 | Not Available | + | 1781778 - 1782983 | 43973.9 |
| conserved hypothetical protein | AfiDRAFT_1755 | Not Available | + | 1783054 - 1784046 | 36529.2 |
| conserved hypothetical protein | AfiDRAFT_1756 | Not Available | + | 1784153 - 1784704 | 20314.9 |
| protein of unknown function duf112 transmembrane | AfiDRAFT_1757 | Not Available | + | 1784717 - 1786228 | 53235.7 |
| transcriptional regulator, tetr family | AfiDRAFT_1758 | Not Available | + | 1786377 - 1787078 | 25700.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
