Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase domain protein | AfiDRAFT_1689 | Not Available | - | 1711744 - 1712334 | 21583.9 |
| catalase/peroxidase hpi | AfiDRAFT_1690 | Not Available | - | 1712465 - 1714654 | 80262.0 |
| transcriptional regulator, lysr family | AfiDRAFT_1691 | Not Available | + | 1714841 - 1715764 | 33686.9 |
| manganese/iron superoxide dismutase-like protein | AfiDRAFT_1692 | Not Available | - | 1715798 - 1716538 | 26814.1 |
| polyribonucleotide nucleotidyltransferase | AfiDRAFT_1693 | Not Available | - | 1716687 - 1718831 | 77373.4 |
| ribosomal protein s15 | AfiDRAFT_1694 | Not Available | - | 1719128 - 1719397 | 10197.3 |
| trna pseudouridine synthase b | AfiDRAFT_1695 | Not Available | - | 1719410 - 1720501 | 39417.9 |
| ribosome-binding factor a | AfiDRAFT_1696 | Not Available | - | 1720501 - 1720923 | 15476.4 |
| translation initiation factor if-2 | AfiDRAFT_1697 | Not Available | - | 1721076 - 1723670 | 92972.1 |
| protein of unknown function duf448 | AfiDRAFT_1698 | Not Available | - | 1723712 - 1724389 | 23890.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
