Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-polyprenylphenol 6-hydroxylase | AfiDRAFT_1679 | Not Available | - | 1702338 - 1703891 | 57432.5 |
| ubiquinone/menaquinone biosynthesis methyltransferase | AfiDRAFT_1680 | Not Available | - | 1703903 - 1704667 | 28205.6 |
| formamidopyrimidine-dna glycosylase | AfiDRAFT_1681 | Not Available | + | 1704745 - 1705626 | 32058.7 |
| uba/thif-type nad/fad binding protein | AfiDRAFT_1682 | Not Available | + | 1705639 - 1706439 | 28189.9 |
| d-isomer specific 2-hydroxyacid dehydrogenase nad-binding | AfiDRAFT_1683 | Not Available | - | 1706446 - 1707444 | 36475.6 |
| protein of unknown function duf1058 | AfiDRAFT_1684 | Not Available | + | 1707676 - 1708233 | 20665.7 |
| ferric uptake regulator, fur family | AfiDRAFT_1685 | Not Available | - | 1708332 - 1708826 | 18515.1 |
| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase faba | AfiDRAFT_1686 | Not Available | + | 1709039 - 1709569 | 19300.4 |
| beta-ketoacyl synthase | AfiDRAFT_1687 | Not Available | + | 1709659 - 1710882 | 43109.4 |
| short-chain dehydrogenase/reductase sdr | AfiDRAFT_1688 | Not Available | + | 1710931 - 1711740 | 28348.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
