Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, asnc family | AfiDRAFT_1640 | Not Available | - | 1656856 - 1657332 | 17648.4 |
| alanine racemase | AfiDRAFT_1641 | Not Available | + | 1657493 - 1658644 | 40717.9 |
| d-amino-acid dehydrogenase | AfiDRAFT_1642 | Not Available | + | 1658641 - 1659900 | 45184.6 |
| endoribonuclease l-psp | AfiDRAFT_1643 | Not Available | + | 1659926 - 1660384 | 15847.2 |
| chromate transporter, chromate ion transporter (chr) family | AfiDRAFT_1644 | Not Available | + | 1660555 - 1661739 | 41270.2 |
| protein of unknown function duf930 | AfiDRAFT_1645 | Not Available | + | 1661878 - 1662270 | 14608.4 |
| protein of unknown function duf88 | AfiDRAFT_1646 | Not Available | - | 1662267 - 1663004 | 27298.3 |
| glycogen/starch/alpha-glucan phosphorylase | AfiDRAFT_1647 | Not Available | - | 1663097 - 1665562 | 92391.3 |
| 3'-5' exonuclease | AfiDRAFT_1648 | Not Available | + | 1665865 - 1666479 | 22747.2 |
| protein of unknown function duf1239 | AfiDRAFT_1649 | Not Available | + | 1666604 - 1667305 | 25245.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
